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MGAT4B alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105299972, updated on 30-Mar-2024

Summary

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Gene symbol
MGAT4B
Gene description
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See MGAT4B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888978.1 (2138032..2147482, complement)

NW_011888978.1Genomic Context describing neighboring genes Neighboring gene mastermind like transcriptional coactivator 1 Neighboring gene crk-like protein pseudogene Neighboring gene leukotriene C4 synthase Neighboring gene sequestosome 1 Neighboring gene uncharacterized LOC111746676 Neighboring gene MRN complex interacting protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888978 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B
Names
mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888978.1 Reference Pvam_2.0

    Range
    2138032..2147482 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011371975.2 → XP_011370277.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B isoform X3

    See identical proteins and their annotated locations for XP_011370277.1

    UniProtKB/TrEMBL
    A0A6P3R2A5
    Conserved Domains (2) summary
    pfam04666
    Location:110 → 387
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
    cd21105
    Location:294 → 314
    PGAP4-like; putative TM2 helix [structural motif]

  2. XM_011371976.1 → XP_011370278.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B isoform X4

    UniProtKB/TrEMBL
    A0A6P3QTQ6
    Conserved Domains (1) summary
    pfam04666
    Location:110 → 349
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  3. XM_011371973.1 → XP_011370275.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B isoform X1

    UniProtKB/TrEMBL
    A0A6P3QWK2
    Conserved Domains (2) summary
    pfam04666
    Location:110 → 387
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
    cd21105
    Location:294 → 314
    PGAP4-like; putative TM2 helix [structural motif]

  4. XM_011371974.2 → XP_011370276.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B isoform X2

    UniProtKB/TrEMBL
    A0A6P3R959
    Conserved Domains (1) summary
    pfam04666
    Location:109 → 386
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
Nucleotide Protein
Heading Accession and Version

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