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CANX calnexin [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105299968, updated on 30-Mar-2024

Summary

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Gene symbol
CANX
Gene description
calnexin
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See CANX in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888978.1 (2035705..2064517)

NW_011888978.1Genomic Context describing neighboring genes Neighboring gene chibby family member 3 Neighboring gene 5S ribosomal RNA Neighboring gene mastermind like transcriptional coactivator 1 Neighboring gene crk-like protein pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888978 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calnexin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888978.1 Reference Pvam_2.0

    Range
    2035705..2064517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011371967.2 → XP_011370269.1  calnexin

    See identical proteins and their annotated locations for XP_011370269.1

    UniProtKB/TrEMBL
    A0A6P6D1P0
    Conserved Domains (1) summary
    pfam00262
    Location:72 → 441
    Calreticulin; Calreticulin family

  2. XM_011371968.2 → XP_011370270.1  calnexin

    See identical proteins and their annotated locations for XP_011370270.1

    UniProtKB/TrEMBL
    A0A6P6D1P0
    Conserved Domains (1) summary
    pfam00262
    Location:72 → 441
    Calreticulin; Calreticulin family

  3. XM_023537725.1 → XP_023393493.1  calnexin

    UniProtKB/TrEMBL
    A0A6P6D1P0
    Conserved Domains (1) summary
    pfam00262
    Location:72 → 441
    Calreticulin; Calreticulin family

  4. XM_023537722.1 → XP_023393490.1  calnexin

    UniProtKB/TrEMBL
    A0A6P6D1P0
    Conserved Domains (1) summary
    pfam00262
    Location:72 → 441
    Calreticulin; Calreticulin family

  5. XM_023537724.1 → XP_023393492.1  calnexin

    UniProtKB/TrEMBL
    A0A6P6D1P0
    Conserved Domains (1) summary
    pfam00262
    Location:72 → 441
    Calreticulin; Calreticulin family
Nucleotide Protein
Heading Accession and Version

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