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NDST1 N-deacetylase and N-sulfotransferase 1 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105299448, updated on 30-Mar-2024

Summary

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Gene symbol
NDST1
Gene description
N-deacetylase and N-sulfotransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See NDST1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888966.1 (1771877..1827093)

NW_011888966.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S14 Neighboring gene uncharacterized LOC111746360 Neighboring gene uncharacterized LOC105299447 Neighboring gene synaptopodin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888966 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1
Names
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888966.1 Reference Pvam_2.0

    Range
    1771877..1827093
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023537302.1 → XP_023393070.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6D0G8
    Conserved Domains (2) summary
    pfam00685
    Location:641 → 891
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:30 → 551
    HSNSD; heparan sulfate-N-deacetylase

  2. XM_023537299.1 → XP_023393067.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6D0G8
    Conserved Domains (2) summary
    pfam00685
    Location:641 → 891
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:30 → 551
    HSNSD; heparan sulfate-N-deacetylase

  3. XM_023537298.1 → XP_023393066.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6D0G8
    Conserved Domains (2) summary
    pfam00685
    Location:641 → 891
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:30 → 551
    HSNSD; heparan sulfate-N-deacetylase

  4. XM_011371185.2 → XP_011369487.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X2

    See identical proteins and their annotated locations for XP_011369487.1

    UniProtKB/TrEMBL
    A0A6P3QT73
    Conserved Domains (2) summary
    pfam00685
    Location:605 → 855
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:30 → 515
    HSNSD; heparan sulfate-N-deacetylase

  5. XM_011371184.2 → XP_011369486.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X2

    See identical proteins and their annotated locations for XP_011369486.1

    UniProtKB/TrEMBL
    A0A6P3QT73
    Conserved Domains (2) summary
    pfam00685
    Location:605 → 855
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:30 → 515
    HSNSD; heparan sulfate-N-deacetylase

  6. XM_023537300.1 → XP_023393068.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6D0G8
    Conserved Domains (2) summary
    pfam00685
    Location:641 → 891
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:30 → 551
    HSNSD; heparan sulfate-N-deacetylase

  7. XM_023537301.1 → XP_023393069.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P6D0G8
    Conserved Domains (2) summary
    pfam00685
    Location:641 → 891
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:30 → 551
    HSNSD; heparan sulfate-N-deacetylase
Nucleotide Protein
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