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ALDH6A1 aldehyde dehydrogenase 6 family member A1 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105299239, updated on 30-Mar-2024

Summary

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Gene symbol
ALDH6A1
Gene description
aldehyde dehydrogenase 6 family member A1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See ALDH6A1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888958.1 (1766564..1785132)

NW_011888958.1Genomic Context describing neighboring genes Neighboring gene small ubiquitin-related modifier 3 pseudogene Neighboring gene lin-52 DREAM MuvB core complex component Neighboring gene 5S ribosomal RNA Neighboring gene U4 spliceosomal RNA Neighboring gene basal body orientation factor 1 Neighboring gene ectonucleoside triphosphate diphosphohydrolase 5 Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888958 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables malonate-semialdehyde dehydrogenase (acetylating) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methylmalonate-semialdehyde dehydrogenase (acylating, NAD) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in thymine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in valine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888958.1 Reference Pvam_2.0

    Range
    1766564..1785132
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011370882.1 → XP_011369184.1  methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial

    UniProtKB/TrEMBL
    A0A6P3QUD4
    Conserved Domains (1) summary
    cd07085
    Location:39 → 515
    ALDH_F6_MMSDH; Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

  2. XM_023537016.1 → XP_023392784.1  methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial

    UniProtKB/TrEMBL
    A0A6P3QUD4
    Conserved Domains (1) summary
    cd07085
    Location:39 → 515
    ALDH_F6_MMSDH; Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2
Nucleotide Protein
Heading Accession and Version

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