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SLC35A1 solute carrier family 35 member A1 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105296990, updated on 30-Mar-2024

Summary

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Gene symbol
SLC35A1
Gene description
solute carrier family 35 member A1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See SLC35A1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888914.1 (4893457..4951986, complement)

NW_011888914.1Genomic Context describing neighboring genes Neighboring gene origin recognition complex subunit 3 Neighboring gene cystatin-A pseudogene Neighboring gene 5S ribosomal RNA Neighboring gene arginyl-tRNA synthetase 2, mitochondrial Neighboring gene cilia and flagella associated protein 206 Neighboring gene chromosome unknown C6orf163 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888914 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyrimidine nucleotide-sugar transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pyrimidine nucleotide-sugar transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-sialic acid transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888914.1 Reference Pvam_2.0

    Range
    4893457..4951986 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023534808.1 → XP_023390576.1  CMP-sialic acid transporter isoform X2

    UniProtKB/TrEMBL
    A0A6P6CSN1
    Conserved Domains (1) summary
    pfam04142
    Location:8 → 295
    Nuc_sug_transp; Nucleotide-sugar transporter

  2. XM_011367378.2 → XP_011365680.1  CMP-sialic acid transporter isoform X1

    UniProtKB/TrEMBL
    A0A6P3QKC3
    Conserved Domains (1) summary
    pfam04142
    Location:8 → 314
    Nuc_sug_transp; Nucleotide-sugar transporter

RNA

  1. XR_002782113.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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