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XYLT2 xylosyltransferase 2 [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105295404, updated on 30-Mar-2024

Summary

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Gene symbol
XYLT2
Gene description
xylosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See XYLT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888885.1 (5177491..5196024, complement)

NW_011888885.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 59 Neighboring gene essential meiotic structure-specific endonuclease 1 Neighboring gene mitochondrial ribosomal protein L27 Neighboring gene transmembrane protein 92 Neighboring gene collagen type I alpha 1 chain

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888885 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888885.1 Reference Pvam_2.0

    Range
    5177491..5196024 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011365069.2 → XP_011363371.1  xylosyltransferase 2 isoform X4

    UniProtKB/TrEMBL
    A0A6P3QHR0
    Conserved Domains (2) summary
    pfam02485
    Location:234 → 486
    Branch; Core-2/I-Branching enzyme
    pfam12529
    Location:519 → 699
    Xylo_C; Xylosyltransferase C terminal

  2. XM_011365067.2 → XP_011363369.1  xylosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A6P3QDV4
    Conserved Domains (2) summary
    pfam02485
    Location:234 → 486
    Branch; Core-2/I-Branching enzyme
    pfam12529
    Location:519 → 699
    Xylo_C; Xylosyltransferase C terminal

  3. XM_011365068.2 → XP_011363370.1  xylosyltransferase 2 isoform X3

    UniProtKB/TrEMBL
    A0A6P3QFU4
    Conserved Domains (2) summary
    pfam02485
    Location:234 → 486
    Branch; Core-2/I-Branching enzyme
    pfam12529
    Location:519 → 699
    Xylo_C; Xylosyltransferase C terminal

  4. XM_011365065.2 → XP_011363367.1  xylosyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A6P3QUG1
    Conserved Domains (2) summary
    pfam02485
    Location:234 → 486
    Branch; Core-2/I-Branching enzyme
    pfam12529
    Location:519 → 699
    Xylo_C; Xylosyltransferase C terminal
Nucleotide Protein
Heading Accession and Version

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