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PIGB phosphatidylinositol glycan anchor biosynthesis class B [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105294299, updated on 30-Mar-2024

Summary

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Gene symbol
PIGB
Gene description
phosphatidylinositol glycan anchor biosynthesis class B
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See PIGB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888866.1 (8199797..8223681, complement)

NW_011888866.1Genomic Context describing neighboring genes Neighboring gene piercer of microtubule wall 2 Neighboring gene cell cycle progression 1 Neighboring gene 5S ribosomal RNA Neighboring gene PIGB opposite strand 1 Neighboring gene 5S ribosomal RNA Neighboring gene RAB27A, member RAS oncogene family

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888866 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888866.1 Reference Pvam_2.0

    Range
    8199797..8223681 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011363457.2 → XP_011361759.1  GPI mannosyltransferase 3 isoform X2

    UniProtKB/TrEMBL
    A0A6P3QQZ6
    Conserved Domains (1) summary
    cl21590
    Location:23 → 513
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_011363456.2 → XP_011361758.1  GPI mannosyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A6P3QEP2
    Conserved Domains (1) summary
    cl21590
    Location:23 → 517
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_023532568.1 → XP_023388336.1  GPI mannosyltransferase 3 isoform X3

    UniProtKB/TrEMBL
    A0A6P6CLH1
    Conserved Domains (1) summary
    cl21590
    Location:2 → 431
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  4. XM_011363458.2 → XP_011361760.1  GPI mannosyltransferase 3 isoform X4

    UniProtKB/TrEMBL
    A0A6P3QKA9
    Conserved Domains (1) summary
    pfam03901
    Location:52 → 436
    Glyco_transf_22; Alg9-like mannosyltransferase family

RNA

  1. XR_002781156.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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