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AFMID arylformamidase [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105293398, updated on 30-Mar-2024

Summary

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Gene symbol
AFMID
Gene description
arylformamidase
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See AFMID in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888853.1 (3914300..3928479)

NW_011888853.1Genomic Context describing neighboring genes Neighboring gene synaptogyrin 2 Neighboring gene thymidine kinase 1 Neighboring gene baculoviral IAP repeat containing 5 Neighboring gene transmembrane protein 235

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888853 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arylformamidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophan catabolic process to kynurenine IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kynurenine formamidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888853.1 Reference Pvam_2.0

    Range
    3914300..3928479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011362018.2 → XP_011360320.1  kynurenine formamidase isoform X1

    UniProtKB/TrEMBL
    A0A6P3Q9M9
    Conserved Domains (2) summary
    pfam12697
    Location:196 → 385
    Abhydrolase_6; Alpha/beta hydrolase family
    cl21494
    Location:196 → 384
    Abhydrolase; alpha/beta hydrolases

  2. XM_011362026.2 → XP_011360328.1  kynurenine formamidase isoform X3

    UniProtKB/TrEMBL
    A0A6P3QHG0
    Conserved Domains (2) summary
    pfam12697
    Location:137 → 326
    Abhydrolase_6; Alpha/beta hydrolase family
    cl21494
    Location:137 → 325
    Abhydrolase; alpha/beta hydrolases

  3. XM_011362031.2 → XP_011360333.1  kynurenine formamidase isoform X5

    UniProtKB/TrEMBL
    A0A6P3QMR0
    Conserved Domains (2) summary
    pfam12697
    Location:92 → 281
    Abhydrolase_6; Alpha/beta hydrolase family
    cl21494
    Location:92 → 280
    Abhydrolase; alpha/beta hydrolases

  4. XM_011362033.2 → XP_011360335.1  kynurenine formamidase isoform X7

    UniProtKB/TrEMBL
    A0A6P3Q7H3
    Conserved Domains (2) summary
    pfam12697
    Location:92 → 281
    Abhydrolase_6; Alpha/beta hydrolase family
    cl21494
    Location:92 → 280
    Abhydrolase; alpha/beta hydrolases

  5. XM_011362023.2 → XP_011360325.1  kynurenine formamidase isoform X2

    See identical proteins and their annotated locations for XP_011360325.1

    UniProtKB/TrEMBL
    A0A6P6CJ59
    Conserved Domains (1) summary
    COG0657
    Location:123 → 316
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  6. XM_023531747.1 → XP_023387515.1  kynurenine formamidase isoform X2

    UniProtKB/TrEMBL
    A0A6P6CJ59
    Conserved Domains (1) summary
    COG0657
    Location:123 → 316
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  7. XM_023531750.1 → XP_023387518.1  kynurenine formamidase isoform X4

    UniProtKB/TrEMBL
    A0A6P6CJN0
    Conserved Domains (1) summary
    COG0657
    Location:90 → 283
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  8. XM_011362032.2 → XP_011360334.1  kynurenine formamidase isoform X6

    UniProtKB/TrEMBL
    A0A6P3QHG5
    Conserved Domains (2) summary
    pfam12697
    Location:73 → 262
    Abhydrolase_6; Alpha/beta hydrolase family
    cl21494
    Location:73 → 261
    Abhydrolase; alpha/beta hydrolases

  9. XM_023531746.1 → XP_023387514.1  kynurenine formamidase isoform X2

    UniProtKB/TrEMBL
    A0A6P6CJ59
    Conserved Domains (1) summary
    COG0657
    Location:123 → 316
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  10. XM_023531749.1 → XP_023387517.1  kynurenine formamidase isoform X4

    UniProtKB/TrEMBL
    A0A6P6CJN0
    Conserved Domains (1) summary
    COG0657
    Location:90 → 283
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  11. XM_011362024.2 → XP_011360326.1  kynurenine formamidase isoform X2

    See identical proteins and their annotated locations for XP_011360326.1

    UniProtKB/TrEMBL
    A0A6P6CJ59
    Conserved Domains (1) summary
    COG0657
    Location:123 → 316
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  12. XM_011362028.2 → XP_011360330.1  kynurenine formamidase isoform X4

    See identical proteins and their annotated locations for XP_011360330.1

    UniProtKB/TrEMBL
    A0A6P6CJN0
    Conserved Domains (1) summary
    COG0657
    Location:90 → 283
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  13. XM_023531748.1 → XP_023387516.1  kynurenine formamidase isoform X2

    UniProtKB/TrEMBL
    A0A6P6CJ59
    Conserved Domains (1) summary
    COG0657
    Location:123 → 316
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  14. XM_011362030.2 → XP_011360332.1  kynurenine formamidase isoform X4

    See identical proteins and their annotated locations for XP_011360332.1

    UniProtKB/TrEMBL
    A0A6P6CJN0
    Conserved Domains (1) summary
    COG0657
    Location:90 → 283
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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