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ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105289535, updated on 18-Sep-2024

Summary

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Gene symbol
ADH5
Gene description
alcohol dehydrogenase 5 (class III), chi polypeptide
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See ADH5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888806.1 (38393..49785)

NW_011888806.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U2-19 Neighboring gene small nucleolar RNA U2-30 Neighboring gene 5S ribosomal RNA Neighboring gene methionyl aminopeptidase 1 Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888806 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in formaldehyde catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alcohol dehydrogenase class-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888806.1 Reference Pvam_2.0

    Range
    38393..49785
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011356244.2 → XP_011354546.1  alcohol dehydrogenase class-3 isoform X2

    UniProtKB/TrEMBL
    A0A6P3PY29
    Conserved Domains (2) summary
    cd08300
    Location:11 → 378
    alcohol_DH_class_III; class III alcohol dehydrogenases
    COG1062
    Location:11 → 379
    FrmA; Zn-dependent alcohol dehydrogenase [General function prediction only]

  2. XM_011356245.2 → XP_011354547.1  alcohol dehydrogenase class-3 isoform X4

    UniProtKB/TrEMBL
    A0A6P3PZR0
    Conserved Domains (2) summary
    TIGR02818
    Location:9 → 345
    adh_III_F_hyde; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
    cd08300
    Location:9 → 344
    alcohol_DH_class_III; class III alcohol dehydrogenases

  3. XM_011356243.2 → XP_011354545.1  alcohol dehydrogenase class-3 isoform X1

    UniProtKB/TrEMBL
    A0A6P3PVH0
    Conserved Domains (2) summary
    cd08300
    Location:22 → 389
    alcohol_DH_class_III; class III alcohol dehydrogenases
    COG1062
    Location:22 → 390
    FrmA; Zn-dependent alcohol dehydrogenase [General function prediction only]

  4. XM_023528411.1 → XP_023384179.1  alcohol dehydrogenase class-3 isoform X3

    UniProtKB/TrEMBL
    A0A6P6C9V9
    Conserved Domains (1) summary
    cd08300
    Location:9 → 355
    alcohol_DH_class_III; class III alcohol dehydrogenases
Nucleotide Protein
Heading Accession and Version

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