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MGAT5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [ Pteropus vampyrus (large flying fox) ]

Gene ID: 105288371, updated on 30-Mar-2024

Summary

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Gene symbol
MGAT5
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus vampyrus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See MGAT5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current Pvam_2.0 (GCF_000151845.1) Unplaced Scaffold NW_011888798.1 (10415094..10717078, complement)

NW_011888798.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 163 Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC105288351 Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene acyl-CoA-binding protein pseudogene Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011888798 Unplaced Scaffold Reference Pvam_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
Names
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus vampyrus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pvam_2.0

Genomic

  1. NW_011888798.1 Reference Pvam_2.0

    Range
    10415094..10717078 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023527509.1 → XP_023383277.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A6P6C7D8
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 460
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 136
    DUF4525; Domain of unknown function (DUF4525)

  2. XM_023527513.1 → XP_023383281.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A6P6C7D8
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 460
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 136
    DUF4525; Domain of unknown function (DUF4525)

  3. XM_023527510.1 → XP_023383278.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A6P6C7D8
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 460
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 136
    DUF4525; Domain of unknown function (DUF4525)

  4. XM_023527512.1 → XP_023383280.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A6P6C7D8
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 460
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 136
    DUF4525; Domain of unknown function (DUF4525)

  5. XM_023527508.1 → XP_023383276.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A6P6C7D8
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 460
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 136
    DUF4525; Domain of unknown function (DUF4525)

  6. XM_023527511.1 → XP_023383279.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A6P6C7D8
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 460
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 136
    DUF4525; Domain of unknown function (DUF4525)

  7. XM_023527514.1 → XP_023383282.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A6P6C7D8
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 460
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 136
    DUF4525; Domain of unknown function (DUF4525)
Nucleotide Protein
Heading Accession and Version

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