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IKKepsilon I-kappaB kinase epsilon [ Ooceraea biroi (clonal raider ant) ]

Gene ID: 105288233, updated on 1-Oct-2024

Summary

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Gene symbol
IKKepsilon
Gene description
I-kappaB kinase epsilon
Locus tag
DMN91_010537
See related
EnsemblRapid:LOC105288233
Gene type
protein coding
RefSeq status
MODEL
Organism
Ooceraea biroi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dorylinae; Ooceraea
Orthologs
honey bee all
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Genomic context

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See IKKepsilon in Genome Data Viewer
Location:
chromosome: 11
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Obir_v5.4 (GCF_003672135.1) 11 NC_039516.1 (2555032..2557990)

Chromosome 11 - NC_039516.1Genomic Context describing neighboring genes Neighboring gene Vacuolar protein sorting-associated protein YL-1 Neighboring gene beta-ureidopropionase pyd3 Neighboring gene bromodomain-containing protein 140 Neighboring gene protein VAC14 homolog Neighboring gene Nucleolar complex protein 3 Neighboring gene ER membrane protein complex subunit 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039516.1 Chromosome 11 Reference Obir_v5.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the clonal raider ant Cerapachys biroi. Oxley PR, et al. Curr Biol, 2014 Feb 17. PMID 24508170, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inhibitor of nuclear factor kappa-B kinase subunit epsilon
Names
Serine/threonine-protein kinase TBK1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ooceraea biroi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Obir_v5.4

Genomic

  1. NC_039516.1 Reference Obir_v5.4

    Range
    2555032..2557990
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011354342.3 → XP_011352644.1  inhibitor of nuclear factor kappa-B kinase subunit epsilon

    See identical proteins and their annotated locations for XP_011352644.1

    UniProtKB/TrEMBL
    A0A026WW17
    Related
    XP_011352644.1, XM_011354342.3
    Conserved Domains (2) summary
    cd12219
    Location:299 → 389
    UBL_TBK1_like; Ubiquitin-Like Domain Of Human Tbk1 and similar proteins
    cl21453
    Location:18 → 332
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases