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Mgat2 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [ Ooceraea biroi (clonal raider ant) ]

Gene ID: 105288012, updated on 10-Oct-2024

Summary

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Gene symbol
Mgat2
Gene description
alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
Locus tag
DMN91_006931
See related
EnsemblRapid:LOC105288012
Gene type
protein coding
RefSeq status
MODEL
Organism
Ooceraea biroi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dorylinae; Ooceraea
Orthologs
fruit fly honey bee all
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Genomic context

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See Mgat2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Obir_v5.4 (GCF_003672135.1) 7 NC_039512.1 (132434..145263, complement)

Chromosome 7 - NC_039512.1Genomic Context describing neighboring genes Neighboring gene locomotion defects Neighboring gene protein D2 Neighboring gene protein D2 Neighboring gene uncharacterized LOC105288050 Neighboring gene uncharacterized LOC113562282

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039512.1 Chromosome 7 Reference Obir_v5.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the clonal raider ant Cerapachys biroi. Oxley PR, et al. Curr Biol, 2014 Feb 17. PMID 24508170, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ooceraea biroi Annotation Release 100

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Obir_v5.4

Genomic

  1. NC_039512.1 Reference Obir_v5.4

    Range
    132434..145263 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011353946.3 → XP_011352248.1  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X1

    See identical proteins and their annotated locations for XP_011352248.1

    UniProtKB/TrEMBL
    A0A026WY48
    Related
    XP_011352248.1, XM_011353946.3
    Conserved Domains (1) summary
    pfam05060
    Location:117 → 575
    MGAT2; N-acetylglucosaminyltransferase II (MGAT2)

  2. XM_011353943.3 → XP_011352245.1  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X1

    See identical proteins and their annotated locations for XP_011352245.1

    UniProtKB/TrEMBL
    A0A026WY48
    Related
    XP_011352245.1, XM_011353943.3
    Conserved Domains (1) summary
    pfam05060
    Location:117 → 575
    MGAT2; N-acetylglucosaminyltransferase II (MGAT2)

  3. XM_011353950.3 → XP_011352252.1  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X2

    See identical proteins and their annotated locations for XP_011352252.1

    Related
    XP_011352252.1, XM_011353950.3
    Conserved Domains (1) summary
    pfam05060
    Location:90 → 548
    MGAT2; N-acetylglucosaminyltransferase II (MGAT2)

  4. XM_011353948.3 → XP_011352250.1  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X2

    See identical proteins and their annotated locations for XP_011352250.1

    Related
    XP_011352250.1, XM_011353948.3
    Conserved Domains (1) summary
    pfam05060
    Location:90 → 548
    MGAT2; N-acetylglucosaminyltransferase II (MGAT2)

  5. XM_011353949.3 → XP_011352251.1  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X2

    See identical proteins and their annotated locations for XP_011352251.1

    Related
    XP_011352251.1, XM_011353949.3
    Conserved Domains (1) summary
    pfam05060
    Location:90 → 548
    MGAT2; N-acetylglucosaminyltransferase II (MGAT2)

  6. XM_011353945.3 → XP_011352247.1  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X1

    See identical proteins and their annotated locations for XP_011352247.1

    UniProtKB/TrEMBL
    A0A026WY48
    Related
    XP_011352247.1, XM_011353945.3
    Conserved Domains (1) summary
    pfam05060
    Location:117 → 575
    MGAT2; N-acetylglucosaminyltransferase II (MGAT2)

  7. XM_011353944.3 → XP_011352246.1  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X1

    See identical proteins and their annotated locations for XP_011352246.1

    UniProtKB/TrEMBL
    A0A026WY48
    Related
    XP_011352246.1, XM_011353944.3
    Conserved Domains (1) summary
    pfam05060
    Location:117 → 575
    MGAT2; N-acetylglucosaminyltransferase II (MGAT2)

  8. XM_020034461.2 → XP_019890020.1  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A026WY48
    Related
    XP_019890020.1, XM_020034461.2
    Conserved Domains (1) summary
    pfam05060
    Location:117 → 575
    MGAT2; N-acetylglucosaminyltransferase II (MGAT2)

  9. XM_011353951.3 → XP_011352253.1  alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase isoform X3

    Related
    XP_011352253.1, XM_011353951.3
    Conserved Domains (1) summary
    pfam05060
    Location:117 → 479
    MGAT2; N-acetylglucosaminyltransferase II (MGAT2)
Nucleotide Protein
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