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Hs3st-A Heparan sulfate 3-O sulfotransferase-A [ Ooceraea biroi (clonal raider ant) ]

Gene ID: 105286868, updated on 1-Oct-2024

Summary

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Gene symbol
Hs3st-A
Gene description
Heparan sulfate 3-O sulfotransferase-A
Locus tag
DMN91_000835
See related
EnsemblRapid:LOC105286868
Gene type
protein coding
RefSeq status
MODEL
Organism
Ooceraea biroi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dorylinae; Ooceraea
Orthologs
honey bee all
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Genomic context

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See Hs3st-A in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Obir_v5.4 (GCF_003672135.1) 1 NC_039506.1 (4447031..4477164, complement)

Chromosome 1 - NC_039506.1Genomic Context describing neighboring genes Neighboring gene RIO kinase 2 Neighboring gene anastral spindle 3 Neighboring gene uncharacterized LOC105286876 Neighboring gene probable protein phosphatase CG10417 Neighboring gene BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039506.1 Chromosome 1 Reference Obir_v5.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the clonal raider ant Cerapachys biroi. Oxley PR, et al. Curr Biol, 2014 Feb 17. PMID 24508170, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ooceraea biroi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Obir_v5.4

Genomic

  1. NC_039506.1 Reference Obir_v5.4

    Range
    4447031..4477164 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011352123.3 → XP_011350425.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    UniProtKB/TrEMBL
    A0A026VTJ2, A0A3L8E313
    Related
    XP_011350425.1, XM_011352123.3
    Conserved Domains (1) summary
    pfam00685
    Location:114 → 371
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases