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LOC105286123 O-glucosyltransferase rumi homolog [ Ooceraea biroi (clonal raider ant) ]

Gene ID: 105286123, updated on 21-Dec-2023

Summary

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Gene symbol
LOC105286123
Gene description
O-glucosyltransferase rumi homolog
Locus tag
DMN91_011441
See related
EnsemblRapid:LOC105286123
Gene type
protein coding
RefSeq status
MODEL
Organism
Ooceraea biroi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dorylinae; Ooceraea
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Genomic context

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See LOC105286123 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Obir_v5.4 (GCF_003672135.1) 12 NC_039517.1 (187791..189692)

Chromosome 12 - NC_039517.1Genomic Context describing neighboring genes Neighboring gene U2 snRNP-associated SURP motif-containing protein Neighboring gene glutamic acid-rich protein Neighboring gene uncharacterized LOC105286118 Neighboring gene Ras GTPase activating protein 1 Neighboring gene Matrix metalloproteinase 1 Neighboring gene Kinesin heavy chain 73

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039517.1 Chromosome 12 Reference Obir_v5.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the clonal raider ant Cerapachys biroi. Oxley PR, et al. Curr Biol, 2014 Feb 17. PMID 24508170, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
O-glucosyltransferase rumi homolog
Names
O-glucosyltransferase rumi-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ooceraea biroi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Obir_v5.4

Genomic

  1. NC_039517.1 Reference Obir_v5.4

    Range
    187791..189692
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011350807.3 → XP_011349109.1  O-glucosyltransferase rumi homolog isoform X2

    Related
    XP_011349109.1, XM_011350807.3
    Conserved Domains (1) summary
    cl23835
    Location:76 → 275
    Glyco_transf_90; Glycosyl transferase family 90

  2. XM_011350806.3 → XP_011349108.1  O-glucosyltransferase rumi homolog isoform X1

    See identical proteins and their annotated locations for XP_011349108.1

    UniProtKB/TrEMBL
    A0A026VVQ5
    Related
    XP_011349108.1, XM_011350806.3
    Conserved Domains (1) summary
    cl23835
    Location:76 → 403
    Glyco_transf_90; Glycosyl transferase family 90
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases