U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105284954 probable C-mannosyltransferase DPY19L1 [ Ooceraea biroi (clonal raider ant) ]

Gene ID: 105284954, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
LOC105284954
Gene description
probable C-mannosyltransferase DPY19L1
Locus tag
DMN91_004064
See related
EnsemblRapid:LOC105284954
Gene type
protein coding
RefSeq status
MODEL
Organism
Ooceraea biroi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dorylinae; Ooceraea
Orthologs
fruit fly honey bee all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105284954 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Obir_v5.4 (GCF_003672135.1) 4 NC_039509.1 (16272238..16276221)

Chromosome 4 - NC_039509.1Genomic Context describing neighboring genes Neighboring gene protein lozenge Neighboring gene brefeldin A-inhibited guanine nucleotide-exchange protein 3 Neighboring gene uncharacterized LOC105284984 Neighboring gene uncharacterized LOC105284974

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_039509.1 Chromosome 4 Reference Obir_v5.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The genome of the clonal raider ant Cerapachys biroi. Oxley PR, et al. Curr Biol, 2014 Feb 17. PMID 24508170, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable C-mannosyltransferase DPY19L1
Names
Protein dumpy-19

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ooceraea biroi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Obir_v5.4

Genomic

  1. NC_039509.1 Reference Obir_v5.4

    Range
    16272238..16276221
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011348843.3 → XP_011347145.1  probable C-mannosyltransferase DPY19L1 isoform X1

    UniProtKB/TrEMBL
    A0A026X2B1, A0A3L8DUA0
    Related
    XP_011347145.1, XM_011348843.3
    Conserved Domains (1) summary
    pfam10034
    Location:33 → 679
    Dpy19; Q-cell neuroblast polarisation

  2. XM_026968855.1 → XP_026824656.1  probable C-mannosyltransferase DPY19L1 isoform X2

    UniProtKB/TrEMBL
    A0A026X2B1
    Related
    XP_026824656.1, XM_026968855.1
    Conserved Domains (1) summary
    pfam10034
    Location:15 → 544
    Dpy19; Q-cell neuroblast polarisation
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases