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PIG-V phosphatidylinositol glycan anchor biosynthesis class V [ Ooceraea biroi (clonal raider ant) ]

Gene ID: 105283494, updated on 1-Oct-2024

Summary

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Gene symbol
PIG-V
Gene description
phosphatidylinositol glycan anchor biosynthesis class V
Locus tag
DMN91_000121
See related
EnsemblRapid:LOC105283494
Gene type
protein coding
RefSeq status
MODEL
Organism
Ooceraea biroi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dorylinae; Ooceraea
Orthologs
honey bee all
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Genomic context

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See PIG-V in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Obir_v5.4 (GCF_003672135.1) 1 NC_039506.1 (22810705..22813362)

Chromosome 1 - NC_039506.1Genomic Context describing neighboring genes Neighboring gene probable cytochrome P450 6a13 Neighboring gene phosphatidylinositol-4-phosphate 3-kinase catalytic subunit Pi3K68D Neighboring gene KH domain-containing, RNA-binding, signal transduction-associated protein 2 Neighboring gene GATOR complex protein Nprl3 Neighboring gene endoribonuclease Dicer-1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039506.1 Chromosome 1 Reference Obir_v5.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the clonal raider ant Cerapachys biroi. Oxley PR, et al. Curr Biol, 2014 Feb 17. PMID 24508170, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ooceraea biroi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Obir_v5.4

Genomic

  1. NC_039506.1 Reference Obir_v5.4

    Range
    22810705..22813362
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011346295.3 → XP_011344597.2  GPI mannosyltransferase 2

    UniProtKB/TrEMBL
    A0A026W3V8, A0A3L8E0Y9
    Related
    XP_011344597.2, XM_011346295.3
    Conserved Domains (1) summary
    cl21590
    Location:11 → 497
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_011346297.3 → XP_011344599.2  GPI mannosyltransferase 2

    UniProtKB/TrEMBL
    A0A026W3V8, A0A3L8E0Y9
    Related
    XP_011344599.2, XM_011346297.3
    Conserved Domains (1) summary
    cl21590
    Location:11 → 497
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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