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LOC105282118 fukutin-related protein [ Ooceraea biroi (clonal raider ant) ]

Gene ID: 105282118, updated on 21-Dec-2023

Summary

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Gene symbol
LOC105282118
Gene description
fukutin-related protein
Locus tag
DMN91_007408
See related
EnsemblRapid:LOC105282118
Gene type
protein coding
RefSeq status
MODEL
Organism
Ooceraea biroi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dorylinae; Ooceraea
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Genomic context

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See LOC105282118 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Obir_v5.4 (GCF_003672135.1) 7 NC_039512.1 (5022..9685)

Chromosome 7 - NC_039512.1Genomic Context describing neighboring genes Neighboring gene U6 snRNA-associated Sm-like protein LSm6 Neighboring gene protein TIPIN homolog Neighboring gene MYCBP-associated protein-like Neighboring gene carbonic anhydrase 1 Neighboring gene uncharacterized LOC105288002

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039512.1 Chromosome 7 Reference Obir_v5.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the clonal raider ant Cerapachys biroi. Oxley PR, et al. Curr Biol, 2014 Feb 17. PMID 24508170, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: fukutin-related protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ooceraea biroi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Obir_v5.4

Genomic

  1. NC_039512.1 Reference Obir_v5.4

    Range
    5022..9685
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011343856.2 → XP_011342158.2  LOW QUALITY PROTEIN: fukutin-related protein

    UniProtKB/TrEMBL
    A0A3L8DK23
    Related
    XP_011342158.2, XM_011343856.2
    Conserved Domains (1) summary
    cl01378
    Location:290 → 330
    LicD; LicD family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases