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Uggt UDP-glucose-glycoprotein glucosyltransferase [ Ooceraea biroi (clonal raider ant) ]

Gene ID: 105281829, updated on 10-Oct-2024

Summary

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Gene symbol
Uggt
Gene description
UDP-glucose-glycoprotein glucosyltransferase
Locus tag
DMN91_005625
See related
EnsemblRapid:LOC105281829
Gene type
protein coding
RefSeq status
MODEL
Organism
Ooceraea biroi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dorylinae; Ooceraea
Orthologs
fruit fly honey bee all
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Genomic context

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See Uggt in Genome Data Viewer
Location:
chromosome: 6
Exon count:
24
Annotation release Status Assembly Chr Location
100 current Obir_v5.4 (GCF_003672135.1) 6 NC_039511.1 (4635229..4643182)

Chromosome 6 - NC_039511.1Genomic Context describing neighboring genes Neighboring gene spermatogenesis-defective protein 39 homolog Neighboring gene Puff-specific protein Bx42 Neighboring gene protein tyrosine phosphatase 36E Neighboring gene uncharacterized LOC113562124 Neighboring gene uncharacterized LOC105281807 Neighboring gene uncharacterized LOC105281823 Neighboring gene vesicle-trafficking protein SEC22

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039511.1 Chromosome 6 Reference Obir_v5.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the clonal raider ant Cerapachys biroi. Oxley PR, et al. Curr Biol, 2014 Feb 17. PMID 24508170, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucose:glycoprotein glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucose:glycoprotein glucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ooceraea biroi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Obir_v5.4

Genomic

  1. NC_039511.1 Reference Obir_v5.4

    Range
    4635229..4643182
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011343345.3 → XP_011341647.1  UDP-glucose:glycoprotein glucosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A3L8DM42
    Related
    XP_011341647.1, XM_011343345.3
    Conserved Domains (2) summary
    cd06432
    Location:1220 → 1467
    GT8_HUGT1_C_like; The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family
    pfam06427
    Location:25 → 1178
    UDP-g_GGTase; UDP-glucose:Glycoprotein Glucosyltransferase

  2. XM_011343354.3 → XP_011341656.1  UDP-glucose:glycoprotein glucosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A3L8DM42
    Related
    XP_011341656.1, XM_011343354.3
    Conserved Domains (2) summary
    cd06432
    Location:1215 → 1462
    GT8_HUGT1_C_like; The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family
    pfam06427
    Location:25 → 1178
    UDP-g_GGTase; UDP-glucose:Glycoprotein Glucosyltransferase
Nucleotide Protein
Heading Accession and Version

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Other Literature Sources
Molecular Biology Databases