U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105281794 mitochondrial basic amino acids transporter [ Ooceraea biroi (clonal raider ant) ]

Gene ID: 105281794, updated on 1-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
LOC105281794
Gene description
mitochondrial basic amino acids transporter
Locus tag
DMN91_001677
See related
EnsemblRapid:LOC105281794
Gene type
protein coding
RefSeq status
MODEL
Organism
Ooceraea biroi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dorylinae; Ooceraea
Orthologs
honey bee all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105281794 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Obir_v5.4 (GCF_003672135.1) 2 NC_039507.1 (2559093..2562740, complement)

Chromosome 2 - NC_039507.1Genomic Context describing neighboring genes Neighboring gene VPS54 subunit of GARP complex scat Neighboring gene kelch-like protein 10 Neighboring gene phenylalanine-4-hydroxylase Neighboring gene circadian locomoter output cycles kaput protein Clock Neighboring gene uncharacterized LOC105281791

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_039507.1 Chromosome 2 Reference Obir_v5.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The genome of the clonal raider ant Cerapachys biroi. Oxley PR, et al. Curr Biol, 2014 Feb 17. PMID 24508170, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high-affinity L-arginine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mitochondrial basic amino acids transporter
Names
Mitochondrial carnitine/acylcarnitine carrier protein CACL

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ooceraea biroi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Obir_v5.4

Genomic

  1. NC_039507.1 Reference Obir_v5.4

    Range
    2559093..2562740 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011343283.3 → XP_011341585.1  mitochondrial basic amino acids transporter

    See identical proteins and their annotated locations for XP_011341585.1

    UniProtKB/TrEMBL
    A0A026W975
    Related
    XP_011341585.1, XM_011343283.3
    Conserved Domains (1) summary
    cl28162
    Location:1 → 255
    Mito_carr; Mitochondrial carrier protein

  2. XM_011343282.3 → XP_011341584.1  mitochondrial basic amino acids transporter

    See identical proteins and their annotated locations for XP_011341584.1

    UniProtKB/TrEMBL
    A0A026W975
    Related
    XP_011341584.1, XM_011343282.3
    Conserved Domains (1) summary
    cl28162
    Location:1 → 255
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases