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beta4GalT7 beta-1,4-galactosyltransferase 7 [ Ooceraea biroi (clonal raider ant) ]

Gene ID: 105280118, updated on 10-Oct-2024

Summary

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Gene symbol
beta4GalT7
Gene description
beta-1,4-galactosyltransferase 7
Locus tag
DMN91_002001
See related
EnsemblRapid:LOC105280118
Gene type
protein coding
RefSeq status
MODEL
Organism
Ooceraea biroi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dorylinae; Ooceraea
Orthologs
fruit fly honey bee all
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Genomic context

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See beta4GalT7 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Obir_v5.4 (GCF_003672135.1) 2 NC_039507.1 (15761252..15763373)

Chromosome 2 - NC_039507.1Genomic Context describing neighboring genes Neighboring gene esterase E4-like Neighboring gene uncharacterized LOC109611019 Neighboring gene transferrin 2 Neighboring gene alpha-2-macroglobulin receptor-associated protein Neighboring gene X-ray repair cross-complementing protein 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039507.1 Chromosome 2 Reference Obir_v5.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the clonal raider ant Cerapachys biroi. Oxley PR, et al. Curr Biol, 2014 Feb 17. PMID 24508170, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables xylosylprotein 4-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ooceraea biroi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Obir_v5.4

Genomic

  1. NC_039507.1 Reference Obir_v5.4

    Range
    15761252..15763373
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011340364.3 → XP_011338666.1  beta-1,4-galactosyltransferase 7

    See identical proteins and their annotated locations for XP_011338666.1

    UniProtKB/TrEMBL
    A0A026WE58
    Related
    XP_011338666.1, XM_011340364.3
    Conserved Domains (1) summary
    cd00899
    Location:65 → 288
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases