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LOC105279534 chitobiosyldiphosphodolichol beta-mannosyltransferase [ Ooceraea biroi (clonal raider ant) ]

Gene ID: 105279534, updated on 1-Oct-2024

Summary

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Gene symbol
LOC105279534
Gene description
chitobiosyldiphosphodolichol beta-mannosyltransferase
Locus tag
DMN91_009312
See related
EnsemblRapid:LOC105279534
Gene type
protein coding
RefSeq status
MODEL
Organism
Ooceraea biroi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dorylinae; Ooceraea
Orthologs
honey bee all
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Genomic context

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See LOC105279534 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Obir_v5.4 (GCF_003672135.1) 9 NC_039514.1 (12691306..12698717, complement)

Chromosome 9 - NC_039514.1Genomic Context describing neighboring genes Neighboring gene FU domain-containing protein T48 Neighboring gene zinc finger protein 271 Neighboring gene uncharacterized LOC105279533 Neighboring gene eukaryotic translation initiation factor 3 subunit L Neighboring gene enhanced level of genomic instability 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039514.1 Chromosome 9 Reference Obir_v5.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables omega peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitobiosyldiphosphodolichol beta-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ooceraea biroi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Obir_v5.4

Genomic

  1. NC_039514.1 Reference Obir_v5.4

    Range
    12691306..12698717 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026972271.1 → XP_026828072.1  chitobiosyldiphosphodolichol beta-mannosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A026WG72
    Related
    XP_026828072.1, XM_026972271.1
    Conserved Domains (2) summary
    cd03816
    Location:40 → 423
    GT1_ALG1_like; This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and ...
    cl00020
    Location:438 → 711
    GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain

  2. XM_011339386.3 → XP_011337688.2  chitobiosyldiphosphodolichol beta-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A026WG72, A0A3L8DEY1
    Related
    XP_011337688.2, XM_011339386.3
    Conserved Domains (2) summary
    cd03816
    Location:40 → 423
    GT1_ALG1_like; This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and ...
    cl00020
    Location:451 → 725
    GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain

RNA

  1. XR_002193276.2 RNA Sequence

    Related
    XR_002193276.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases