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Xxylt Xyloside xylosyltransferase [ Ooceraea biroi (clonal raider ant) ]

Gene ID: 105275640, updated on 10-Oct-2024

Summary

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Gene symbol
Xxylt
Gene description
Xyloside xylosyltransferase
Locus tag
DMN91_004472
See related
EnsemblRapid:LOC105275640
Gene type
protein coding
RefSeq status
MODEL
Organism
Ooceraea biroi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dorylinae; Ooceraea
Orthologs
fruit fly honey bee all
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Genomic context

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See Xxylt in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Obir_v5.4 (GCF_003672135.1) 4 NC_039509.1 (11017500..11020489, complement)

Chromosome 4 - NC_039509.1Genomic Context describing neighboring genes Neighboring gene pyroglutamyl-peptidase 1 Neighboring gene activated Cdc42 kinase-like Neighboring gene integrator complex subunit 14 Neighboring gene uncharacterized LOC105275680 Neighboring gene uncharacterized LOC105275647 Neighboring gene tripartite motif-containing protein 2 Neighboring gene uncharacterized LOC105275691

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039509.1 Chromosome 4 Reference Obir_v5.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the clonal raider ant Cerapachys biroi. Oxley PR, et al. Curr Biol, 2014 Feb 17. PMID 24508170, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloside xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ooceraea biroi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Obir_v5.4

Genomic

  1. NC_039509.1 Reference Obir_v5.4

    Range
    11017500..11020489 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011332620.3 → XP_011330922.1  xyloside xylosyltransferase 1

    See identical proteins and their annotated locations for XP_011330922.1

    UniProtKB/TrEMBL
    A0A026X2E8
    Related
    XP_011330922.1, XM_011332620.3
    Conserved Domains (1) summary
    cl11394
    Location:89 → 326
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases