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shams glucoside xylosyltransferase 1 shams [ Fopius arisanus ]

Gene ID: 105267365, updated on 10-Oct-2024

Summary

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Gene symbol
shams
Gene description
glucoside xylosyltransferase 1 shams
Gene type
protein coding
RefSeq status
MODEL
Organism
Fopius arisanus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ichneumonoidea; Braconidae; Opiinae; Fopius
Also known as
Gxylt1_2
Orthologs
fruit fly honey bee all
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Genomic context

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See shams in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_07 current ASM80636v1 (GCF_000806365.1) Unplaced Scaffold NW_011887741.1 (2367628..2369486)

NW_011887741.1Genomic Context describing neighboring genes Neighboring gene asperous Neighboring gene uncharacterized LOC105267353 Neighboring gene PDZ domain-containing protein GIPC-like protein kermit Neighboring gene Succinyl-CoA:3-ketoacid CoA transferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011887741 Unplaced Scaffold Reference ASM80636v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucoside xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000806365.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80636v1

Genomic

  1. NW_011887741.1 Reference ASM80636v1

    Range
    2367628..2369486
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011306173.1 → XP_011304475.1  glucoside xylosyltransferase 1

    UniProtKB/TrEMBL
    A0A0C9R7Z6, A0A9R1T807
    Conserved Domains (2) summary
    COG1442
    Location:63 → 280
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]
    cl11394
    Location:61 → 352
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases