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Scgdelta sarcoglycan delta [ Fopius arisanus ]

Gene ID: 105266527, updated on 10-Oct-2024

Summary

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Gene symbol
Scgdelta
Gene description
sarcoglycan delta
Gene type
protein coding
RefSeq status
MODEL
Organism
Fopius arisanus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ichneumonoidea; Braconidae; Opiinae; Fopius
Also known as
Sgcz_2; Sgcz_3
Annotation information
Annotation category: partial on reference assembly
Orthologs
fruit fly honey bee all
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Genomic context

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See Scgdelta in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_07 current ASM80636v1 (GCF_000806365.1) Unplaced Scaffold NW_011887741.1 (1324781..1447606)

NW_011887741.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105266522 Neighboring gene pickled eggs Neighboring gene uncharacterized LOC105266548 Neighboring gene otopetrin-3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011887741 Unplaced Scaffold Reference ASM80636v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zeta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000806365.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80636v1

Genomic

  1. NW_011887741.1 Reference ASM80636v1

    Range
    1324781..1447606
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011304768.1 → XP_011303070.1  zeta-sarcoglycan

    See identical proteins and their annotated locations for XP_011303070.1

    UniProtKB/TrEMBL
    A0A0C9PTZ8, A0A0C9QMS5, A0A9R1T583
    Conserved Domains (1) summary
    pfam04790
    Location:133 → 402
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases