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LOC105256620 dnaJ homolog subfamily B member 6 [ Camponotus floridanus (Florida carpenter ant) ]

Gene ID: 105256620, updated on 1-Oct-2024

Summary

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Gene symbol
LOC105256620
Gene description
dnaJ homolog subfamily B member 6
Locus tag
EAG_01617
See related
EnsemblRapid:LOC105256620
Gene type
protein coding
RefSeq status
MODEL
Organism
Camponotus floridanus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Formicinae; Camponotus
Orthologs
honey bee all
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Genomic context

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See LOC105256620 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Cflo_v7.5 (GCF_003227725.1) Unplaced Scaffold NW_020229370.1 (3827985..3834823)
101 previous assembly CamFlo_1.0 (GCF_000147175.1) Unplaced Scaffold NW_011885320.1 (1226642..1233467)

NW_020229370.1Genomic Context describing neighboring genes Neighboring gene Nuclear factor I Neighboring gene Actin-related protein 2/3 complex, subunit 4 Neighboring gene Acyl-CoA binding protein 1 Neighboring gene ceramide glucosyltransferase Neighboring gene ATP-dependent DNA helicase hay

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltator. Bonasio R, et al. Science, 2010 Aug 27. PMID 20798317, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6; dnaJ homolog subfamily B member 6-B
Names
DnaJ-like protein subfamily B member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camponotus floridanus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cflo_v7.5

Genomic

  1. NW_020229370.1 Reference Cflo_v7.5

    Range
    3827985..3834823
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011266714.3 → XP_011265016.1  dnaJ homolog subfamily B member 6-B isoform X1

    See identical proteins and their annotated locations for XP_011265016.1

    Related
    XP_011265016.1, XM_011266714.3
    Conserved Domains (1) summary
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain

  2. XM_011266722.3 → XP_011265024.1  dnaJ homolog subfamily B member 6 isoform X2

    See identical proteins and their annotated locations for XP_011265024.1

    UniProtKB/TrEMBL
    E2AW05
    Related
    XP_011265024.1, XM_011266722.3
    Conserved Domains (1) summary
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain

  3. XM_011266717.3 → XP_011265019.1  dnaJ homolog subfamily B member 6-B isoform X1

    See identical proteins and their annotated locations for XP_011265019.1

    Related
    XP_011265019.1, XM_011266717.3
    Conserved Domains (1) summary
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain

  4. XM_011266718.3 → XP_011265020.1  dnaJ homolog subfamily B member 6-B isoform X1

    See identical proteins and their annotated locations for XP_011265020.1

    Related
    XP_011265020.1, XM_011266718.3
    Conserved Domains (1) summary
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain

  5. XM_011266716.3 → XP_011265018.1  dnaJ homolog subfamily B member 6-B isoform X1

    See identical proteins and their annotated locations for XP_011265018.1

    Related
    XP_011265018.1, XM_011266716.3
    Conserved Domains (1) summary
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain

  6. XM_011266719.3 → XP_011265021.1  dnaJ homolog subfamily B member 6-B isoform X1

    See identical proteins and their annotated locations for XP_011265021.1

    Related
    XP_011265021.1, XM_011266719.3
    Conserved Domains (1) summary
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain

  7. XM_011266720.3 → XP_011265022.1  dnaJ homolog subfamily B member 6-B isoform X1

    See identical proteins and their annotated locations for XP_011265022.1

    Related
    XP_011265022.1, XM_011266720.3
    Conserved Domains (1) summary
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain

RNA

  1. XR_889599.3 RNA Sequence

    Related
    XR_889599.3
Nucleotide Protein Strain
Heading Accession and Version

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