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Pgant9 polypeptide N-acetylgalactosaminyltransferase 9 [ Camponotus floridanus (Florida carpenter ant) ]

Gene ID: 105255483, updated on 10-Oct-2024

Summary

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Gene symbol
Pgant9
Gene description
polypeptide N-acetylgalactosaminyltransferase 9
Locus tag
EAG_09626
See related
EnsemblRapid:LOC105255483
Gene type
protein coding
RefSeq status
MODEL
Organism
Camponotus floridanus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Formicinae; Camponotus
Orthologs
fruit fly honey bee all
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Genomic context

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See Pgant9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current Cflo_v7.5 (GCF_003227725.1) Unplaced Scaffold NW_020229303.1 (380910..576236)
101 previous assembly CamFlo_1.0 (GCF_000147175.1) Unplaced Scaffold NW_011884336.1 (108018..302983, complement)

NW_020229303.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105255503 Neighboring gene brachyenteron Neighboring gene serine-enriched protein Neighboring gene UPF0746 protein DDB_G0281095

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltator. Bonasio R, et al. Science, 2010 Aug 27. PMID 20798317, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative polypeptide N-acetylgalactosaminyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camponotus floridanus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cflo_v7.5

Genomic

  1. NW_020229303.1 Reference Cflo_v7.5

    Range
    380910..576236
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011264780.3 → XP_011263082.2  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    Related
    XP_011263082.2, XM_011264780.3
    Conserved Domains (2) summary
    cd02510
    Location:169 → 466
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:477 → 596
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_011264782.3 → XP_011263084.2  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X2

    Related
    XP_011263084.2, XM_011264782.3
    Conserved Domains (2) summary
    cd02510
    Location:169 → 466
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:477 → 594
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_025407548.1 → XP_025263333.1  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    Related
    XP_025263333.1, XM_025407548.1
    Conserved Domains (2) summary
    cd02510
    Location:169 → 466
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:477 → 596
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  4. XM_011264781.3 → XP_011263083.2  putative polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    Related
    XP_011263083.2, XM_011264781.3
    Conserved Domains (2) summary
    cd02510
    Location:169 → 466
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:477 → 596
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein Strain
Heading Accession and Version

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