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LOC105254458 LARGE xylosyl- and glucuronyltransferase 1 [ Camponotus floridanus (Florida carpenter ant) ]

Gene ID: 105254458, updated on 1-Oct-2024

Summary

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Gene symbol
LOC105254458
Gene description
LARGE xylosyl- and glucuronyltransferase 1
Locus tag
EAG_03624
See related
EnsemblRapid:LOC105254458
Gene type
protein coding
RefSeq status
MODEL
Organism
Camponotus floridanus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Formicinae; Camponotus
Orthologs
honey bee all
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Genomic context

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See LOC105254458 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current Cflo_v7.5 (GCF_003227725.1) Unplaced Scaffold NW_020229781.1 (572573..578224, complement)
101 previous assembly CamFlo_1.0 (GCF_000147175.1) Unplaced Scaffold NW_011883546.1 (1340462..1346119, complement)

NW_020229781.1Genomic Context describing neighboring genes Neighboring gene guanylate cyclase 1 soluble subunit alpha 2 Neighboring gene kekkon 5 Neighboring gene sushi domain containing 2 mesh Neighboring gene CCR4-NOT transcription complex subunit Pop2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltator. Bonasio R, et al. Science, 2010 Aug 27. PMID 20798317, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LARGE xylosyl- and glucuronyltransferase 1
Names
glycosyltransferase-like protein LARGE1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camponotus floridanus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cflo_v7.5

Genomic

  1. NW_020229781.1 Reference Cflo_v7.5

    Range
    572573..578224 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011263139.3 → XP_011261441.1  LARGE xylosyl- and glucuronyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_011261441.1

    Related
    XP_011261441.1, XM_011263139.3
    Conserved Domains (3) summary
    COG1442
    Location:74 → 321
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]
    pfam13896
    Location:398 → 668
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
    cl11394
    Location:75 → 352
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_011263140.3 → XP_011261442.1  LARGE xylosyl- and glucuronyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_011261442.1

    Related
    XP_011261442.1, XM_011263140.3
    Conserved Domains (3) summary
    COG1442
    Location:74 → 321
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]
    pfam13896
    Location:398 → 668
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
    cl11394
    Location:75 → 352
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_011263141.2 → XP_011261443.1  LARGE xylosyl- and glucuronyltransferase 1 isoform X2

    See identical proteins and their annotated locations for XP_011261443.1

    UniProtKB/TrEMBL
    E2AP21
    Related
    XP_011261443.1, XM_011263141.2
    Conserved Domains (2) summary
    pfam13896
    Location:320 → 590
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
    cl11394
    Location:1 → 274
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein Strain
Heading Accession and Version

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