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LOC105253529 methylmalonic aciduria and homocystinuria type D homolog, mitochondrial [ Camponotus floridanus (Florida carpenter ant) ]

Gene ID: 105253529, updated on 10-Oct-2024

Summary

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Gene symbol
LOC105253529
Gene description
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial
Locus tag
EAG_03123
See related
EnsemblRapid:LOC105253529
Gene type
protein coding
RefSeq status
MODEL
Organism
Camponotus floridanus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Formicinae; Camponotus
Orthologs
fruit fly honey bee all
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Genomic context

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See LOC105253529 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Cflo_v7.5 (GCF_003227725.1) Unplaced Scaffold NW_020229214.1 (236026..237981)
101 previous assembly CamFlo_1.0 (GCF_000147175.1) Unplaced Scaffold NW_011882475.1 (124826..127456, complement)

NW_020229214.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105253534 Neighboring gene uncharacterized LOC105253531 Neighboring gene clavesin-1 Neighboring gene rhophilin Neighboring gene touch insensitive larva B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltator. Bonasio R, et al. Science, 2010 Aug 27. PMID 20798317, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylmalonic aciduria and homocystinuria type D homolog, mitochondrial
Names
Protein C2orf25, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camponotus floridanus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cflo_v7.5

Genomic

  1. NW_020229214.1 Reference Cflo_v7.5

    Range
    236026..237981
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011261616.3 → XP_011259918.1  methylmalonic aciduria and homocystinuria type D homolog, mitochondrial

    UniProtKB/TrEMBL
    E2AKP9
    Related
    XP_011259918.1, XM_011261616.3
    Conserved Domains (1) summary
    pfam10229
    Location:64 → 268
    DUF2246; Uncharacterized conserved protein (DUF2246)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases