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LOC105250941 KICSTOR complex protein kaptin [ Camponotus floridanus (Florida carpenter ant) ]

Gene ID: 105250941, updated on 1-Oct-2024

Summary

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Gene symbol
LOC105250941
Gene description
KICSTOR complex protein kaptin
Locus tag
EAG_15890
See related
EnsemblRapid:LOC105250941
Gene type
protein coding
RefSeq status
MODEL
Organism
Camponotus floridanus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Formicinae; Camponotus
Orthologs
honey bee all
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Genomic context

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See LOC105250941 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Cflo_v7.5 (GCF_003227725.1) Unplaced Scaffold NW_020229303.1 (3034695..3037827, complement)
101 previous assembly CamFlo_1.0 (GCF_000147175.1) Unplaced Scaffold NW_011880675.1 (979163..982237)

NW_020229303.1Genomic Context describing neighboring genes Neighboring gene calmodulin Neighboring gene tetratricopeptide repeat domain 7 Neighboring gene annexin B9 Neighboring gene uncharacterized LOC105250940 Neighboring gene succinate dehydrogenase, subunit D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltator. Bonasio R, et al. Science, 2010 Aug 27. PMID 20798317, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin
Names
kaptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camponotus floridanus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cflo_v7.5

Genomic

  1. NW_020229303.1 Reference Cflo_v7.5

    Range
    3034695..3037827 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011257345.2 → XP_011255647.1  KICSTOR complex protein kaptin isoform X2

    See identical proteins and their annotated locations for XP_011255647.1

    UniProtKB/TrEMBL
    E2ACR6
    Related
    XP_011255647.1, XM_011257345.2
    Conserved Domains (1) summary
    pfam13517
    Location:327 → 385
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella

  2. XM_011257341.3 → XP_011255643.1  KICSTOR complex protein kaptin isoform X1

    UniProtKB/TrEMBL
    E2ACR6
    Related
    XP_011255643.1, XM_011257341.3
    Conserved Domains (1) summary
    pfam13517
    Location:332 → 390
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella

  3. XM_011257343.3 → XP_011255645.1  KICSTOR complex protein kaptin isoform X2

    See identical proteins and their annotated locations for XP_011255645.1

    UniProtKB/TrEMBL
    E2ACR6
    Related
    XP_011255645.1, XM_011257343.3
    Conserved Domains (1) summary
    pfam13517
    Location:327 → 385
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella

  4. XM_011257344.3 → XP_011255646.1  KICSTOR complex protein kaptin isoform X2

    See identical proteins and their annotated locations for XP_011255646.1

    UniProtKB/TrEMBL
    E2ACR6
    Related
    XP_011255646.1, XM_011257344.3
    Conserved Domains (1) summary
    pfam13517
    Location:327 → 385
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
Nucleotide Protein Strain
Heading Accession and Version

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