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brn beta-1,3-galactosyltransferase brn [ Camponotus floridanus (Florida carpenter ant) ]

Gene ID: 105250101, updated on 10-Oct-2024

Summary

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Gene symbol
brn
Gene description
beta-1,3-galactosyltransferase brn
See related
EnsemblRapid:LOC105250101
Gene type
protein coding
RefSeq status
MODEL
Organism
Camponotus floridanus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Formicinae; Camponotus
Orthologs
fruit fly honey bee all
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Genomic context

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See brn in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Cflo_v7.5 (GCF_003227725.1) Unplaced Scaffold NW_020229850.1 (760664..762710)
101 previous assembly CamFlo_1.0 (GCF_000147175.1) Unplaced Scaffold NW_011880137.1 (161257..163271, complement)

NW_020229850.1Genomic Context describing neighboring genes Neighboring gene probable G-protein coupled receptor B0563.6 Neighboring gene probable serine/threonine-protein kinase DDB_G0282963 Neighboring gene Sjoegren syndrome nuclear autoantigen 1 homolog Neighboring gene UHRF1-binding protein 1-like Neighboring gene zinc finger CCCH domain-containing protein 11A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase brn

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camponotus floridanus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cflo_v7.5

Genomic

  1. NW_020229850.1 Reference Cflo_v7.5

    Range
    760664..762710
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011256031.3 → XP_011254333.1  beta-1,3-galactosyltransferase brn

    Related
    XP_011254333.1, XM_011256031.3
    Conserved Domains (1) summary
    cl21608
    Location:121 → 416
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases