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Hs6st heparan sulfate 6-O-sulfotransferase [ Camponotus floridanus (Florida carpenter ant) ]

Gene ID: 105249116, updated on 22-May-2024

Summary

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Gene symbol
Hs6st
Gene description
heparan sulfate 6-O-sulfotransferase
Locus tag
EAG_10584
See related
EnsemblRapid:LOC105249116
Gene type
protein coding
RefSeq status
MODEL
Organism
Camponotus floridanus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Formicinae; Camponotus
Orthologs
fruit fly all
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Genomic context

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See Hs6st in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Cflo_v7.5 (GCF_003227725.1) Unplaced Scaffold NW_020229258.1 (17229..21363, complement)
101 previous assembly CamFlo_1.0 (GCF_000147175.1) Unplaced Scaffold NW_011879345.1 (6782..10912, complement)

NW_020229258.1Genomic Context describing neighboring genes Neighboring gene SPRY domain-containing protein 7 Neighboring gene ribosomal protein L35A Neighboring gene dynactin subunit 3 Neighboring gene uncharacterized LOC105257277

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltator. Bonasio R, et al. Science, 2010 Aug 27. PMID 20798317, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 2
Names
Heparan-sulfate 6-O-sulfotransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camponotus floridanus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cflo_v7.5

Genomic

  1. NW_020229258.1 Reference Cflo_v7.5

    Range
    17229..21363 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011254349.3 → XP_011252651.1  heparan-sulfate 6-O-sulfotransferase 2

    See identical proteins and their annotated locations for XP_011252651.1

    UniProtKB/TrEMBL
    E2A704
    Related
    XP_011252651.1, XM_011254349.3
    Conserved Domains (1) summary
    pfam03567
    Location:163 → 424
    Sulfotransfer_2; Sulfotransferase family

  2. XM_011254347.3 → XP_011252649.1  heparan-sulfate 6-O-sulfotransferase 2

    See identical proteins and their annotated locations for XP_011252649.1

    UniProtKB/TrEMBL
    E2A704
    Related
    XP_011252649.1, XM_011254347.3
    Conserved Domains (1) summary
    pfam03567
    Location:163 → 424
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein Strain
Heading Accession and Version

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