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Gm42354 predicted gene, 42354 [ Mus musculus (house mouse) ]

Gene ID: 105247218, updated on 17-Aug-2024

Summary

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Official Symbol
Gm42354provided by MGI
Official Full Name
predicted gene, 42354provided by MGI
Primary source
MGI:MGI:5625239
See related
AllianceGenome:MGI:5625239
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm42354 in Genome Data Viewer
Location:
4 E2; 4
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (149875148..149886990)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (149790691..149802529)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene solute carrier family 25, member 33 Neighboring gene STARR-seq mESC enhancer starr_12124 Neighboring gene predicted gene 13073 Neighboring gene STARR-seq mESC enhancer starr_12127 Neighboring gene STARR-positive B cell enhancer ABC_E3555 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:149230571-149230822 Neighboring gene predicted gene, 54270 Neighboring gene STARR-seq mESC enhancer starr_12128 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:149250416-149250525 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:149254138-149254291 Neighboring gene STARR-seq mESC enhancer starr_12129 Neighboring gene STARR-seq mESC enhancer starr_12130 Neighboring gene splA/ryanodine receptor domain and SOCS box containing 1 Neighboring gene predicted gene 13070

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    149875148..149886990
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_881588.2 RNA Sequence

  2. XR_004942231.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials