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Gm42243 predicted gene, 42243 [ Mus musculus (house mouse) ]

Gene ID: 105247070, updated on 17-Aug-2024

Summary

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Official Symbol
Gm42243provided by MGI
Official Full Name
predicted gene, 42243provided by MGI
Primary source
MGI:MGI:5625128
See related
AllianceGenome:MGI:5625128
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm42243 in Genome Data Viewer
Location:
5 B1; 5
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (29045654..29063427)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (28840656..28858429)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 9530036O11Rik Neighboring gene STARR-seq mESC enhancer starr_12723 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene STARR-seq mESC enhancer starr_12725 Neighboring gene Shh lung-gut enhancer Neighboring gene predicted gene, 52839 Neighboring gene Shh brain enhancer 4 Neighboring gene predicted gene, 35688 Neighboring gene Shh brain enhancer 2 Neighboring gene Shh brain enhancer 3 Neighboring gene predicted gene, 35881

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    29045654..29063427
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_880913.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials