U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Gm42000 predicted gene, 42000 [ Mus musculus (house mouse) ]

Gene ID: 105246758, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
Gm42000provided by MGI
Official Full Name
predicted gene, 42000provided by MGI
Primary source
MGI:MGI:5624885
See related
AllianceGenome:MGI:5624885
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Gm42000 in Genome Data Viewer
Location:
3 A1; 3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (15121155..15126891)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (15056095..15061831)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_07008 Neighboring gene carbonic anhydrase 2 Neighboring gene STARR-seq mESC enhancer starr_07009 Neighboring gene RIKEN cDNA A930001A20 gene Neighboring gene STARR-seq mESC enhancer starr_07011 Neighboring gene STARR-seq mESC enhancer starr_07012 Neighboring gene STARR-seq mESC enhancer starr_07013 Neighboring gene STARR-seq mESC enhancer starr_07014 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene STARR-seq mESC enhancer starr_07015 Neighboring gene STARR-seq mESC enhancer starr_07016 Neighboring gene STARR-seq mESC enhancer starr_07017 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:15105686-15105889 Neighboring gene STARR-seq mESC enhancer starr_07022 Neighboring gene predicted gene, 33819 Neighboring gene STARR-positive B cell enhancer ABC_E7901 Neighboring gene STARR-positive B cell enhancer ABC_E7902 Neighboring gene STARR-seq mESC enhancer starr_07024 Neighboring gene STARR-seq mESC enhancer starr_07025 Neighboring gene STARR-seq mESC enhancer starr_07026 Neighboring gene signal regulatory protein delta

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    15121155..15126891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_878682.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Research Materials