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Gm41717 predicted gene, 41717 [ Mus musculus (house mouse) ]

Gene ID: 105246427, updated on 17-Aug-2024

Summary

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Official Symbol
Gm41717provided by MGI
Official Full Name
predicted gene, 41717provided by MGI
Primary source
MGI:MGI:5624602
See related
AllianceGenome:MGI:5624602
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm41717 in Genome Data Viewer
Location:
18 B3; 18
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (44448782..44461387)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (44315715..44328320)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene serine peptidase inhibitor, Kazal type 11 Neighboring gene predicted gene, 41716 Neighboring gene neuropeptide Y receptor Y6 Neighboring gene STARR-seq mESC enhancer starr_44458 Neighboring gene myotilin Neighboring gene STARR-seq mESC enhancer starr_44459 Neighboring gene STARR-seq mESC enhancer starr_44461 Neighboring gene STARR-positive B cell enhancer ABC_E9976 Neighboring gene decapping mRNA 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_166742.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC132130

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    44448782..44461387
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials