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Gm41517 predicted gene, 41517 [ Mus musculus (house mouse) ]

Gene ID: 105246183, updated on 17-Aug-2024

Summary

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Official Symbol
Gm41517provided by MGI
Official Full Name
predicted gene, 41517provided by MGI
Primary source
MGI:MGI:5624402
See related
AllianceGenome:MGI:5624402
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm41517 in Genome Data Viewer
Location:
17 A1; 17
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (4995010..5018428, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (4944735..4968153, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_41671 Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene 17_26.1 Neighboring gene predicted gene, 34507 Neighboring gene STARR-seq mESC enhancer starr_41674 Neighboring gene predicted gene, 34625 Neighboring gene STARR-positive B cell enhancer ABC_E8650 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:5009913-5010101 Neighboring gene AT-rich interaction domain 1B Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:5036377-5036486 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:5089638-5089825 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:5098834-5099017 Neighboring gene STARR-seq mESC enhancer starr_41681 Neighboring gene STARR-seq mESC enhancer starr_41683 Neighboring gene tubulin, alpha 1B pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E10929 Neighboring gene STARR-seq mESC enhancer starr_41685 Neighboring gene predicted gene, 34854

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    4995010..5018428 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004939632.1 RNA Sequence

  2. XR_876352.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials