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Gm40988 predicted gene, 40988 [ Mus musculus (house mouse) ]

Gene ID: 105245543, updated on 17-Aug-2024

Summary

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Official Symbol
Gm40988provided by MGI
Official Full Name
predicted gene, 40988provided by MGI
Primary source
MGI:MGI:5623873
See related
AllianceGenome:MGI:5623873
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 1.8) See more
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Genomic context

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See Gm40988 in Genome Data Viewer
Location:
13 B3; 13
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (66843409..66859229)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (66695345..66711165)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_34878 Neighboring gene predicted gene, 46429 Neighboring gene STARR-seq mESC enhancer starr_34879 Neighboring gene STARR-seq mESC enhancer starr_34880 Neighboring gene predicted gene, 18412 Neighboring gene zinc finger protein 640 Neighboring gene STARR-seq mESC enhancer starr_34881 Neighboring gene vomeronasal 2, receptor, pseudogene 106 Neighboring gene STARR-seq mESC enhancer starr_34883 Neighboring gene predicted gene, 52033 Neighboring gene STARR-seq mESC enhancer starr_34884 Neighboring gene predicted gene, 40989

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    66843409..66859229
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_873610.2 RNA Sequence

  2. XR_873611.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials