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Gm40820 predicted gene, 40820 [ Mus musculus (house mouse) ]

Gene ID: 105245348, updated on 17-Aug-2024

Summary

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Official Symbol
Gm40820provided by MGI
Official Full Name
predicted gene, 40820provided by MGI
Primary source
MGI:MGI:5623705
See related
AllianceGenome:MGI:5623705
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in cortex adult (RPKM 1.0), frontal lobe adult (RPKM 0.8) and 7 other tissues See more
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Genomic context

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See Gm40820 in Genome Data Viewer
Location:
11 A4; 11
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (30264938..30283159)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (30314938..30333158)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene spectrin beta, non-erythrocytic 1 Neighboring gene predicted gene, 51887 Neighboring gene STARR-seq mESC enhancer starr_29056 Neighboring gene predicted gene 8098 Neighboring gene STARR-seq mESC enhancer starr_29057 Neighboring gene STARR-seq mESC enhancer starr_29058 Neighboring gene stress-induced phosphoprotein 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_29059 Neighboring gene predicted gene, 53677 Neighboring gene ciliary microtubule inner protein 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    30264938..30283159
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_872333.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials