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Gm40061 predicted gene, 40061 [ Mus musculus (house mouse) ]

Gene ID: 105244456, updated on 17-Aug-2024

Summary

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Official Symbol
Gm40061provided by MGI
Official Full Name
predicted gene, 40061provided by MGI
Primary source
MGI:MGI:5622946
See related
AllianceGenome:MGI:5622946
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm40061 in Genome Data Viewer
Location:
3 E1; 3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (61299568..61320455)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (61392147..61413034)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr3:61162239-61162540 Neighboring gene STARR-seq mESC enhancer starr_07794 Neighboring gene predicted gene, 19901 Neighboring gene STARR-seq mESC enhancer starr_07795 Neighboring gene STARR-seq mESC enhancer starr_07797 Neighboring gene RAP2B, member of RAS oncogene family Neighboring gene STARR-seq mESC enhancer starr_07798 Neighboring gene predicted gene, 57706 Neighboring gene STARR-seq mESC enhancer starr_07799 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene STARR-seq mESC enhancer starr_07800 Neighboring gene STARR-seq mESC enhancer starr_07801 Neighboring gene STARR-seq mESC enhancer starr_07802 Neighboring gene STARR-seq mESC enhancer starr_07803 Neighboring gene STARR-seq mESC enhancer starr_07804 Neighboring gene STARR-seq mESC enhancer starr_07805 Neighboring gene STARR-seq mESC enhancer starr_07806 Neighboring gene predicted gene, 54176

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    61299568..61320455
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_867334.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials