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Gm40005 predicted gene, 40005 [ Mus musculus (house mouse) ]

Gene ID: 105244386, updated on 17-Aug-2024

Summary

Official Symbol
Gm40005provided by MGI
Official Full Name
predicted gene, 40005provided by MGI
Primary source
MGI:MGI:5622890
See related
AllianceGenome:MGI:5622890
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 3.5) See more
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Genomic context

See Gm40005 in Genome Data Viewer
Location:
2 H3; 2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (171804082..171807542)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (171962162..171965622)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 35529 Neighboring gene STARR-seq mESC enhancer starr_06556 Neighboring gene STARR-seq mESC enhancer starr_06559 Neighboring gene predicted gene, 35580 Neighboring gene STARR-seq mESC enhancer starr_06560 Neighboring gene STARR-seq mESC enhancer starr_06561 Neighboring gene RIKEN cDNA 1700028P15 gene Neighboring gene STARR-seq mESC enhancer starr_06563 Neighboring gene STARR-seq mESC enhancer starr_06565 Neighboring gene cerebellin 4 precursor protein Neighboring gene N(alpha)-acetyltransferase 10, NatA catalytic subunitNalpha acetyltransferase 10 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    171804082..171807542
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_867055.3 RNA Sequence