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Gm13404 predicted gene 13404 [ Mus musculus (house mouse) ]

Gene ID: 105244124, updated on 17-Aug-2024

Summary

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Official Symbol
Gm13404provided by MGI
Official Full Name
predicted gene 13404provided by MGI
Primary source
MGI:MGI:3649379
See related
AllianceGenome:MGI:3649379
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in genital fat pad adult (RPKM 1.5), CNS E14 (RPKM 0.4) and 5 other tissues See more
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Genomic context

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See Gm13404 in Genome Data Viewer
Location:
2 22.68 cM; 2 B
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (33832271..33908167)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (33942259..34018155)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr2:33763748-33764049 Neighboring gene STARR-seq mESC enhancer starr_04250 Neighboring gene predicted gene, 39792 Neighboring gene STARR-positive B cell enhancer mm9_chr2:33789434-33789735 Neighboring gene predicted gene, 39793 Neighboring gene predicted gene 13403 Neighboring gene RIKEN cDNA C230014O12 gene Neighboring gene STARR-seq mESC enhancer starr_04251 Neighboring gene predicted gene, 54111 Neighboring gene pre B cell leukemia homeobox 3 Neighboring gene STARR-seq mESC enhancer starr_04257

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Global discovery of erythroid long noncoding RNAs reveals novel regulators of red cell maturation. Alvarez-Dominguez JR, et al. Blood, 2014 Jan 23. PMID 24200680, Free PMC Article
  2. Widespread and dynamic translational control of red blood cell development. Alvarez-Dominguez JR, et al. Blood, 2017 Feb 2. PMID 27899360, Free PMC Article
  3. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    33832271..33908167
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_866147.3 RNA Sequence

  2. XR_866145.1 RNA Sequence

  3. XR_866144.3 RNA Sequence

  4. XR_866146.4 RNA Sequence

  5. XR_866140.1 RNA Sequence

  6. XR_866142.1 RNA Sequence

  7. XR_001783274.1 RNA Sequence

  8. XR_866149.1 RNA Sequence

  9. XR_003954031.1 RNA Sequence

  10. XR_004940890.1 RNA Sequence

  11. XR_866143.1 RNA Sequence

  12. XR_866141.1 RNA Sequence

  13. XR_003954030.1 RNA Sequence

  14. XR_001783273.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials