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Gm39790 predicted gene, 39790 [ Mus musculus (house mouse) ]

Gene ID: 105244121, updated on 17-Aug-2024

Summary

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Official Symbol
Gm39790provided by MGI
Official Full Name
predicted gene, 39790provided by MGI
Primary source
MGI:MGI:5622675
See related
AllianceGenome:MGI:5622675
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in mammary gland adult (RPKM 10.8), limb E14.5 (RPKM 1.8) and 3 other tissues See more
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Genomic context

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See Gm39790 in Genome Data Viewer
Location:
2 B; 2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (33529673..33530483)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (33639661..33640471)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 33642 Neighboring gene predicted gene, 39789 Neighboring gene LIM homeobox transcription factor 1 beta Neighboring gene Riken cDNA C130021I20 gene Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:33544353-33544554 Neighboring gene RIKEN cDNA 9430024E24 gene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    33529673..33530483
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_866136.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials