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Gm39536 predicted gene, 39536 [ Mus musculus (house mouse) ]

Gene ID: 105243723, updated on 8-Feb-2024

Summary

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Official Symbol
Gm39536provided by MGI
Official Full Name
predicted gene, 39536provided by MGI
Primary source
MGI:MGI:5622421
See related
AllianceGenome:MGI:5622421
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm39536 in Genome Data Viewer
Location:
X F1; X
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (135604284..135609535, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (136703535..136708786, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene transcription elongation factor A (SII)-like 3 Neighboring gene acyl-protein thioesterase 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_47978 Neighboring gene transcription elongation factor A (SII)-like 1 Neighboring gene STARR-positive B cell enhancer ABC_E3262 Neighboring gene STARR-positive B cell enhancer ABC_E11056 Neighboring gene mortality factor 4 like 2 Neighboring gene cDNA sequence BC065397 Neighboring gene glycine receptor, alpha 4 subunit Neighboring gene predicted gene, 54085

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    135604284..135609535 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_878248.2 RNA Sequence

  2. XR_878247.2 RNA Sequence

  3. XR_004940445.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials