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LOC105243553 uncharacterized LOC105243553 [ Mus musculus (house mouse) ]

Gene ID: 105243553, updated on 9-Aug-2024

Summary

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Gene symbol
LOC105243553
Gene description
uncharacterized LOC105243553
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105243553 in Genome Data Viewer
Location:
11 E1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (109581384..109597923)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (109690558..109707091)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E11498 Neighboring gene predicted gene 11685 Neighboring gene STARR-seq mESC enhancer starr_31024 Neighboring gene STARR-positive B cell enhancer ABC_E7090 Neighboring gene protein kinase, cAMP dependent regulatory, type I, alpha Neighboring gene predicted gene, 39443 Neighboring gene STARR-positive B cell enhancer mm9_chr11:109531775-109532076 Neighboring gene STARR-positive B cell enhancer mm9_chr11:109533241-109533541 Neighboring gene FAM20A, golgi associated secretory pathway pseudokinase Neighboring gene STARR-seq mESC enhancer starr_31027 Neighboring gene STARR-seq mESC enhancer starr_31028 Neighboring gene STARR-seq mESC enhancer starr_31029 Neighboring gene predicted gene, 42093 Neighboring gene RIKEN cDNA 1700012B07 gene Neighboring gene predicted gene 11683

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    109581384..109597923
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_003949610.2 RNA Sequence

  2. XR_003949611.1 RNA Sequence

  3. XR_001780353.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials