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Gm39258 predicted gene, 39258 [ Mus musculus (house mouse) ]

Gene ID: 105243297, updated on 17-Aug-2024

Summary

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Official Symbol
Gm39258provided by MGI
Official Full Name
predicted gene, 39258provided by MGI
Primary source
MGI:MGI:5622143
See related
AllianceGenome:MGI:5622143
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 2.3) See more
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Genomic context

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See Gm39258 in Genome Data Viewer
Location:
8 E1; 8
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (117254624..117256140, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (116527885..116529401, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr8:119028691-119028992 Neighboring gene STARR-seq mESC enhancer starr_22798 Neighboring gene dynein light chain roadblock-type 2 Neighboring gene ribosomal protein S3A pseudogene Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:119111671-119111780 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:119114162-119114494 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:119114548-119114808 Neighboring gene chromodomain protein, Y chromosome-like 2 Neighboring gene predicted gene, 31367 Neighboring gene STARR-positive B cell enhancer mm9_chr8:119159393-119159693 Neighboring gene STARR-seq mESC enhancer starr_22801 Neighboring gene STARR-positive B cell enhancer ABC_E8265 Neighboring gene STARR-positive B cell enhancer ABC_E6689 Neighboring gene RIKEN cDNA 4930563M20 gene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    117254624..117256140 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_879226.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials