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Gm39128 predicted gene, 39128 [ Mus musculus (house mouse) ]

Gene ID: 105243117, updated on 17-Aug-2024

Summary

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Official Symbol
Gm39128provided by MGI
Official Full Name
predicted gene, 39128provided by MGI
Primary source
MGI:MGI:5622013
See related
Ensembl:ENSMUSG00000109064 AllianceGenome:MGI:5622013
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm44517
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm39128 in Genome Data Viewer
Location:
8 A1.1; 8
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (9217556..9224786)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (9167556..9174774)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4933430N04 gene Neighboring gene RIKEN cDNA 4930453L07 gene Neighboring gene STARR-seq mESC enhancer starr_20682 Neighboring gene predicted gene, 31726 Neighboring gene NALCN channel auxiliary factor 1 Neighboring gene STARR-seq mESC enhancer starr_20686 Neighboring gene STARR-seq mESC enhancer starr_20687 Neighboring gene STARR-seq mESC enhancer starr_20688 Neighboring gene STARR-seq mESC enhancer starr_20691 Neighboring gene STARR-seq mESC enhancer starr_20692 Neighboring gene STARR-seq mESC enhancer starr_20693 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:9912234-9912417 Neighboring gene STARR-seq mESC enhancer starr_20694 Neighboring gene STARR-positive B cell enhancer ABC_E8225 Neighboring gene STARR-positive B cell enhancer ABC_E10489 Neighboring gene ligase IV, DNA, ATP-dependent

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    9217556..9224786
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_870129.4 RNA Sequence

    Related
    ENSMUST00000208237.2

  2. XR_870130.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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