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Gm38860 predicted gene, 38860 [ Mus musculus (house mouse) ]

Gene ID: 105242717, updated on 17-Aug-2024

Summary

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Official Symbol
Gm38860provided by MGI
Official Full Name
predicted gene, 38860provided by MGI
Primary source
MGI:MGI:5621745
See related
AllianceGenome:MGI:5621745
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm38860 in Genome Data Viewer
Location:
6 D1; 6
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (90980377..90987652)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (91009977..91010670)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene IQ motif and Sec7 domain 1 Neighboring gene predicted gene, 25185 Neighboring gene protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 2 Neighboring gene STARR-positive B cell enhancer ABC_E4844 Neighboring gene STARR-seq mESC enhancer starr_16632 Neighboring gene nucleoporin 210 Neighboring gene STARR-positive B cell enhancer ABC_E4845 Neighboring gene STARR-positive B cell enhancer ABC_E10395 Neighboring gene STARR-positive B cell enhancer ABC_E6455 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:91064892-91065075 Neighboring gene predicted gene, 53297 Neighboring gene predicted gene, 30364

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    90980377..90987652
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_869266.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials