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Gm38845 predicted gene, 38845 [ Mus musculus (house mouse) ]

Gene ID: 105242699, updated on 22-Oct-2024

Summary

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Official Symbol
Gm38845provided by MGI
Official Full Name
predicted gene, 38845provided by MGI
Primary source
MGI:MGI:5621730
See related
Ensembl:ENSMUSG00000133059 AllianceGenome:MGI:5621730
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm38845 in Genome Data Viewer
Location:
6 C3; 6
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (84456827..84499018, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (84479845..84522036, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_16475 Neighboring gene dysferlin Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:84045049-84045232 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:84097670-84097919 Neighboring gene STARR-seq mESC enhancer starr_16479 Neighboring gene STARR-seq mESC enhancer starr_16480 Neighboring gene STARR-seq mESC enhancer starr_16481 Neighboring gene STARR-seq mESC enhancer starr_16482 Neighboring gene predicted gene 10445 Neighboring gene RIKEN cDNA 4930504D19 gene Neighboring gene STARR-seq mESC enhancer starr_16484 Neighboring gene cytochrome P450, family 26, subfamily b, polypeptide 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    84456827..84499018 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_869206.2 RNA Sequence

  2. XR_869205.2 RNA Sequence

    Related
    ENSMUST00000315693.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials