U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105233925 irregular chiasm C-roughest protein [ Bactrocera dorsalis (oriental fruit fly) ]

Gene ID: 105233925, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
LOC105233925
Gene description
irregular chiasm C-roughest protein
See related
EnsemblRapid:LOC105233925
Gene type
protein coding
RefSeq status
MODEL
Organism
Bactrocera dorsalis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Bactrocera; Bactrocera
Also known as
ICCR
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105233925 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
103 current ASM2337382v1 (GCF_023373825.1) 4 NC_064306.1 (29250072..29573029)
102 previous assembly ASM78921v2 (GCF_000789215.1) Unplaced Scaffold NW_011876184.1 (302838..364425, complement)

Chromosome 4 - NC_064306.1Genomic Context describing neighboring genes Neighboring gene kin of irre Neighboring gene uncharacterized LOC105233200 Neighboring gene estradiol 17-beta-dehydrogenase 8 Neighboring gene uncharacterized LOC105233923

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Characterizing the developmental transcriptome of the oriental fruit fly, Bactrocera dorsalis (Diptera: Tephritidae) through comparative genomic analysis with Drosophila melanogaster utilizing modENCODE datasets. Geib SM, et al. BMC Genomics, 2014 Oct 28. PMID 25348373, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
irregular chiasm C-roughest protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Bactrocera dorsalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2337382v1 Primary Assembly

Genomic

  1. NC_064306.1 Reference ASM2337382v1 Primary Assembly

    Range
    29250072..29573029
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049456253.1 → XP_049312210.1  irregular chiasm C-roughest protein

    UniProtKB/TrEMBL
    A0A8N4L0J6
    Related
    XP_049312210.1, XM_049456253.1

  2. XM_049456252.1 → XP_049312209.1  irregular chiasm C-roughest protein

    UniProtKB/TrEMBL
    A0A8N4L0J6
    Related
    XP_049312209.1, XM_049456252.1

  3. XM_049456251.1 → XP_049312208.1  irregular chiasm C-roughest protein

    UniProtKB/TrEMBL
    A0A8N4L0J6
    Related
    XP_049312208.1, XM_049456251.1

  4. XM_049456250.1 → XP_049312207.1  irregular chiasm C-roughest protein

    UniProtKB/TrEMBL
    A0A8N4L0J6
    Related
    XP_049312207.1, XM_049456250.1

  5. XM_049456254.1 → XP_049312211.1  irregular chiasm C-roughest protein

    UniProtKB/TrEMBL
    A0A8N4L0J6
    Related
    XP_049312211.1, XM_049456254.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases