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LOC105232119 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A [ Bactrocera dorsalis (oriental fruit fly) ]

Gene ID: 105232119, updated on 10-May-2024

Summary

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Gene symbol
LOC105232119
Gene description
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
See related
EnsemblRapid:LOC105232119
Gene type
protein coding
RefSeq status
MODEL
Organism
Bactrocera dorsalis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Bactrocera; Bactrocera
Also known as
Pde9a
Orthologs
fruit fly all
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Genomic context

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See LOC105232119 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
103 current ASM2337382v1 (GCF_023373825.1) 4 NC_064306.1 (5883679..6078112)
102 previous assembly ASM78921v2 (GCF_000789215.1) Unplaced Scaffold NW_011876398.1 (2914089..3110482)

Chromosome 4 - NC_064306.1Genomic Context describing neighboring genes Neighboring gene Flavin adenine dinucleotide synthetase 1 Neighboring gene ubiquinone biosynthesis protein COQ8, mitochondrial Neighboring gene uncharacterized LOC109579954 Neighboring gene neprilysin-4 Neighboring gene neprilysin-11 Neighboring gene endoribonuclease CG2145 Neighboring gene uncharacterized LOC105232123 Neighboring gene protein toll-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNA sequencing to characterize transcriptional changes of sexual maturation and mating in the female oriental fruit fly Bactrocera dorsalis. Zheng W, et al. BMC Genomics, 2016 Mar 5. PMID 26946038, Free PMC Article
  2. Characterizing the developmental transcriptome of the oriental fruit fly, Bactrocera dorsalis (Diptera: Tephritidae) through comparative genomic analysis with Drosophila melanogaster utilizing modENCODE datasets. Geib SM, et al. BMC Genomics, 2014 Oct 28. PMID 25348373, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
Names
phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bactrocera dorsalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2337382v1 Primary Assembly

Genomic

  1. NC_064306.1 Reference ASM2337382v1 Primary Assembly

    Range
    5883679..6078112
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011213727.4 → XP_011212029.2  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Related
    XP_011212029.2, XM_011213727.4

  2. XM_049454463.1 → XP_049310420.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Related
    XP_049310420.1, XM_049454463.1

  3. XM_049454462.1 → XP_049310419.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Related
    XP_049310419.1, XM_049454462.1

  4. XM_049454461.1 → XP_049310418.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Related
    XP_049310418.1, XM_049454461.1

  5. XM_049454460.1 → XP_049310417.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Related
    XP_049310417.1, XM_049454460.1

  6. XM_049454465.1 → XP_049310422.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Related
    XP_049310422.1, XM_049454465.1

  7. XM_049454464.1 → XP_049310421.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Related
    XP_049310421.1, XM_049454464.1
Nucleotide Protein
Heading Accession and Version

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